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Motif Scanning
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iPEP v2.51 Today is
Proteome motif scanning
Data Source
*
SwissProt human protein data (2008-10-15)
Motif
*
(
Prosite
: P-X-[ST]-P.)
Digestion
*
(Choose 2)
Trypsin
Arg C
Lys C
Lys N
Acid hydrolysis
Asp N
V8 Phosphate
V8 Bicarbonate
Pepsin (PH 1.3)
Pepsin (PH 2.0)
Proteinase K
Thermolysin
Chymotrypsin high specificity
Chymotrypsin low specificity
CNBr
IBA
NTCB
V8/Lys C
Asp N/N-terminal Glu
Asp N/Lys C
Trypsin/Chymotrypsin
IBA/CNBr
Molecular weight
ESI Ion Trap (600~3500 Da)
LTQ Orbitrap (600~4000 Da)
MALDI TOF/TOF (750~5500 Da)
Other, please specify. Min
Max
(Da)
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